IL_5LKS_176

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGAC*GAAUCCC

Length

12 nucleotides

Bulged bases

5LKS|1|L5|A|944, 5LKS|1|L5|C|946

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|720
5LKS|1|L5|G|721
5LKS|1|L5|G|722
5LKS|1|L5|A|723
5LKS|1|L5|C|724
*
5LKS|1|L5|G|942
5LKS|1|L5|A|943
5LKS|1|L5|A|944
5LKS|1|L5|U|945
5LKS|1|L5|C|946
5LKS|1|L5|C|947
5LKS|1|L5|C|948

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LC

60S ribosomal protein L4

Chain LE

60S ribosomal protein L6

Chain LF

60S ribosomal protein L7

Chain LS

60S ribosomal protein L18a