3D structure

PDB id
5LKS (explore in PDB, NAKB, or RNA 3D Hub)
Description
Structure-function insights reveal the human ribosome as a cancer target for antibiotics
Experimental method
ELECTRON MICROSCOPY
Resolution
3.6 Å

Loop

Sequence
GCGGGGAAGGUGG*UGUUACAGCCCCCC
Length
27 nucleotides
Bulged bases
5LKS|1|L5|G|748
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

5LKS|1|L5|G|740
5LKS|1|L5|C|741
5LKS|1|L5|G|742
5LKS|1|L5|G|743
5LKS|1|L5|G|744
5LKS|1|L5|G|745
5LKS|1|L5|A|746
5LKS|1|L5|A|747
5LKS|1|L5|G|748
5LKS|1|L5|G|749
5LKS|1|L5|U|750
5LKS|1|L5|G|751
5LKS|1|L5|G|752
*
5LKS|1|L5|U|911
5LKS|1|L5|G|912
5LKS|1|L5|U|913
5LKS|1|L5|U|914
5LKS|1|L5|A|915
5LKS|1|L5|C|916
5LKS|1|L5|A|917
5LKS|1|L5|G|918
5LKS|1|L5|C|919
5LKS|1|L5|C|920
5LKS|1|L5|C|921
5LKS|1|L5|C|922
5LKS|1|L5|C|923
5LKS|1|L5|C|924

Current chains

Chain L5
28S ribosomal RNA

Nearby chains

Chain LH
60S ribosomal protein L9
Chain LM
60S ribosomal protein L14
Chain LS
60S ribosomal protein L18a

Coloring options:

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