IL_5LKS_180

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGGGAUCCCGAG*CGAGGGCGCACCA

Length

25 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|U|1423
5LKS|1|L5|G|1424
5LKS|1|L5|G|1425
5LKS|1|L5|G|1426
5LKS|1|L5|A|1427
5LKS|1|L5|U|1428
5LKS|1|L5|C|1429
5LKS|1|L5|C|1430
5LKS|1|L5|C|1431
5LKS|1|L5|G|1432
5LKS|1|L5|A|1433
5LKS|1|L5|G|1434
*
5LKS|1|L5|C|1450
5LKS|1|L5|G|1451
5LKS|1|L5|A|1452
5LKS|1|L5|G|1453
5LKS|1|L5|G|1454
5LKS|1|L5|G|1455
5LKS|1|L5|C|1456
5LKS|1|L5|G|1457
5LKS|1|L5|C|1458
5LKS|1|L5|A|1459
5LKS|1|L5|C|1460
5LKS|1|L5|C|1461
5LKS|1|L5|A|1462

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LQ

60S ribosomal protein L18

Chain Lb

Ribosomal protein L29, isoform CRA_a