IL_5LKS_181
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- UCGC*GGA
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LKS_181 not in the Motif Atlas
- Geometric match to IL_8P9A_292
- Geometric discrepancy: 0.3039
- The information below is about IL_8P9A_292
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_15698.5
- Basepair signature
- cWW-L-R-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
5LKS|1|L5|U|1473
5LKS|1|L5|C|1474
5LKS|1|L5|G|1475
5LKS|1|L5|C|1476
*
5LKS|1|L5|G|1489
5LKS|1|L5|G|1490
5LKS|1|L5|A|1491
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain LL
- 60S ribosomal protein L13
- Chain La
- 60S ribosomal protein L27a
- Chain Lb
- Ribosomal protein L29, isoform CRA_a
- Chain Lo
- 60S ribosomal protein L36a
Coloring options: