IL_5LKS_183

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGCGAAGCCA*UGGUGGAGGUC

Length

21 nucleotides

Bulged bases

5LKS|1|L5|G|1577

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|1549
5LKS|1|L5|G|1550
5LKS|1|L5|C|1551
5LKS|1|L5|G|1552
5LKS|1|L5|A|1553
5LKS|1|L5|A|1554
5LKS|1|L5|G|1555
5LKS|1|L5|C|1556
5LKS|1|L5|C|1557
5LKS|1|L5|A|1558
*
5LKS|1|L5|U|1569
5LKS|1|L5|G|1570
5LKS|1|L5|G|1571
5LKS|1|L5|U|1572
5LKS|1|L5|G|1573
5LKS|1|L5|G|1574
5LKS|1|L5|A|1575
5LKS|1|L5|G|1576
5LKS|1|L5|G|1577
5LKS|1|L5|U|1578
5LKS|1|L5|C|1579

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LA

60S ribosomal protein L8

Chain LR

60S ribosomal protein L19

Chain Lp

60S ribosomal protein L37a

Chain S2

Small subunit ribosomal RNA; SSU rRNA