IL_5LKS_209

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUCU*AACGUGAG

Length

12 nucleotides

Bulged bases

5LKS|1|L5|A|4518, 5LKS|1|L5|C|4519, 5LKS|1|L5|G|4522, 5LKS|1|L5|A|4523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|C|4456
5LKS|1|L5|U|4457
5LKS|1|L5|C|4458
5LKS|1|L5|U|4459
*
5LKS|1|L5|A|4517
5LKS|1|L5|A|4518
5LKS|1|L5|C|4519
5LKS|1|L5|G|4520
5LKS|1|L5|U|4521
5LKS|1|L5|G|4522
5LKS|1|L5|A|4523
5LKS|1|L5|G|4524

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LV

60S ribosomal protein L23