IL_5LKS_216

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGUUUCGUACGUAG*CUAUUGAAAGUCAGCC

Length

30 nucleotides

Bulged bases

5LKS|1|L5|G|5041, 5LKS|1|L5|G|5049

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|L5|G|4999
5LKS|1|L5|G|5000
5LKS|1|L5|U|5001
5LKS|1|L5|U|5002
5LKS|1|L5|U|5003
5LKS|1|L5|C|5004
5LKS|1|L5|G|5005
5LKS|1|L5|U|5006
5LKS|1|L5|A|5007
5LKS|1|L5|C|5008
5LKS|1|L5|G|5009
5LKS|1|L5|U|5010
5LKS|1|L5|A|5011
5LKS|1|L5|G|5012
*
5LKS|1|L5|C|5036
5LKS|1|L5|U|5037
5LKS|1|L5|A|5038
5LKS|1|L5|U|5039
5LKS|1|L5|U|5040
5LKS|1|L5|G|5041
5LKS|1|L5|A|5042
5LKS|1|L5|A|5043
5LKS|1|L5|A|5044
5LKS|1|L5|G|5045
5LKS|1|L5|U|5046
5LKS|1|L5|C|5047
5LKS|1|L5|A|5048
5LKS|1|L5|G|5049
5LKS|1|L5|C|5050
5LKS|1|L5|C|5051

Current chains

Chain L5

28S ribosomal RNA

Nearby chains

Chain LB

60S ribosomal protein L3

Chain LW

60S ribosomal protein L24

Chain Ld

60S ribosomal protein L31