IL_5LKS_223

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GGGG*CGAUUCC

Length

11 nucleotides

Bulged bases

5LKS|1|S2|U|428

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|G|410
5LKS|1|S2|G|411
5LKS|1|S2|G|412
5LKS|1|S2|G|413
*
5LKS|1|S2|C|424
5LKS|1|S2|G|425
5LKS|1|S2|A|426
5LKS|1|S2|U|427
5LKS|1|S2|U|428
5LKS|1|S2|C|429
5LKS|1|S2|C|430

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SE

40S ribosomal protein S4, X isoform

Chain SJ

40S ribosomal protein S9

Chain SX

40S ribosomal protein S23