IL_5LKS_225

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

AAUACAG*CCUGUAAUU

Length

16 nucleotides

Bulged bases

5LKS|1|S2|A|555, 5LKS|1|S2|U|556

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|A|528
5LKS|1|S2|A|529
5LKS|1|S2|U|530
5LKS|1|S2|A|531
5LKS|1|S2|C|532
5LKS|1|S2|A|533
5LKS|1|S2|G|534
*
5LKS|1|S2|C|549
5LKS|1|S2|C|550
5LKS|1|S2|U|551
5LKS|1|S2|G|552
5LKS|1|S2|U|553
5LKS|1|S2|A|554
5LKS|1|S2|A|555
5LKS|1|S2|U|556
5LKS|1|S2|U|557

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SJ

40S ribosomal protein S9

Chain Se

Ribosomal protein S30