IL_5LKS_228
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GAAAAAAUUAGAGUGUUCAAAGCAGG*CCUGGAUACCGCAGC
- Length
- 41 nucleotides
- Bulged bases
- 5LKS|1|S2|G|821
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|S2|G|807
5LKS|1|S2|A|808
5LKS|1|S2|A|809
5LKS|1|S2|A|810
5LKS|1|S2|A|811
5LKS|1|S2|A|812
5LKS|1|S2|A|813
5LKS|1|S2|U|814
5LKS|1|S2|U|815
5LKS|1|S2|A|816
5LKS|1|S2|G|817
5LKS|1|S2|A|818
5LKS|1|S2|G|819
5LKS|1|S2|U|820
5LKS|1|S2|G|821
5LKS|1|S2|U|822
5LKS|1|S2|U|823
5LKS|1|S2|C|824
5LKS|1|S2|A|825
5LKS|1|S2|A|826
5LKS|1|S2|A|827
5LKS|1|S2|G|828
5LKS|1|S2|C|829
5LKS|1|S2|A|830
5LKS|1|S2|G|831
5LKS|1|S2|G|832
*
5LKS|1|S2|C|842
5LKS|1|S2|C|843
5LKS|1|S2|U|844
5LKS|1|S2|G|845
5LKS|1|S2|G|846
5LKS|1|S2|A|847
5LKS|1|S2|U|848
5LKS|1|S2|A|849
5LKS|1|S2|C|850
5LKS|1|S2|C|851
5LKS|1|S2|G|852
5LKS|1|S2|C|853
5LKS|1|S2|A|854
5LKS|1|S2|G|855
5LKS|1|S2|C|856
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SE
- 40S ribosomal protein S4, X isoform
- Chain SJ
- 40S ribosomal protein S9
- Chain SL
- 40S ribosomal protein S11
- Chain SW
- 40S ribosomal protein S15a
- Chain SY
- 40S ribosomal protein S24
Coloring options: