IL_5LKS_234

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

UGGAGCGAUUUGUC*GAUAA

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|U|1350
5LKS|1|S2|G|1351
5LKS|1|S2|G|1352
5LKS|1|S2|A|1353
5LKS|1|S2|G|1354
5LKS|1|S2|C|1355
5LKS|1|S2|G|1356
5LKS|1|S2|A|1357
5LKS|1|S2|U|1358
5LKS|1|S2|U|1359
5LKS|1|S2|U|1360
5LKS|1|S2|G|1361
5LKS|1|S2|U|1362
5LKS|1|S2|C|1363
*
5LKS|1|S2|G|1375
5LKS|1|S2|A|1376
5LKS|1|S2|U|1377
5LKS|1|S2|A|1378
5LKS|1|S2|A|1379

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SA

40S ribosomal protein SA

Chain SC

40S ribosomal protein S2

Chain SR

40S ribosomal protein S17

Chain SV

40S ribosomal protein S21