IL_5LKS_235

3D structure

PDB id

5LKS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure-function insights reveal the human ribosome as a cancer target for antibiotics

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CAUGCUA*UAGAGG

Length

13 nucleotides

Bulged bases

5LKS|1|S2|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LKS|1|S2|C|1395
5LKS|1|S2|A|1396
5LKS|1|S2|U|1397
5LKS|1|S2|G|1398
5LKS|1|S2|C|1399
5LKS|1|S2|U|1400
5LKS|1|S2|A|1401
*
5LKS|1|S2|U|1445
5LKS|1|S2|A|1446
5LKS|1|S2|G|1447
5LKS|1|S2|A|1448
5LKS|1|S2|G|1449
5LKS|1|S2|G|1450

Current chains

Chain S2

18S ribosomal RNA

Nearby chains

Chain SQ

40S ribosomal protein S16

Chain SR

40S ribosomal protein S17

Chain SU

40S ribosomal protein S20

Chain Sg

Receptor of activated protein C kinase 1