IL_5LKS_258
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CUCAUCAGACCCCAGAAAAGG*CCUGAAAAUGGAUGGCGCUGGAG
- Length
- 44 nucleotides
- Bulged bases
- 5LKS|1|L5|U|1930, 5LKS|1|L5|C|1931, 5LKS|1|L5|C|1935, 5LKS|1|L5|G|1940, 5LKS|1|L5|A|2041, 5LKS|1|L5|U|2044, 5LKS|1|L5|G|2045, 5LKS|1|L5|G|2055
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|L5|C|1926
5LKS|1|L5|U|1927
5LKS|1|L5|C|1928
5LKS|1|L5|A|1929
5LKS|1|L5|U|1930
5LKS|1|L5|C|1931
5LKS|1|L5|A|1932
5LKS|1|L5|G|1933
5LKS|1|L5|A|1934
5LKS|1|L5|C|1935
5LKS|1|L5|C|1936
5LKS|1|L5|C|1937
5LKS|1|L5|C|1938
5LKS|1|L5|A|1939
5LKS|1|L5|G|1940
5LKS|1|L5|A|1941
5LKS|1|L5|A|1942
5LKS|1|L5|A|1943
5LKS|1|L5|A|1944
5LKS|1|L5|G|1945
5LKS|1|L5|G|1946
*
5LKS|1|L5|C|2036
5LKS|1|L5|C|2037
5LKS|1|L5|U|2038
5LKS|1|L5|G|2039
5LKS|1|L5|A|2040
5LKS|1|L5|A|2041
5LKS|1|L5|A|2042
5LKS|1|L5|A|2043
5LKS|1|L5|U|2044
5LKS|1|L5|G|2045
5LKS|1|L5|G|2046
5LKS|1|L5|A|2047
5LKS|1|L5|U|2048
5LKS|1|L5|G|2049
5LKS|1|L5|G|2050
5LKS|1|L5|C|2051
5LKS|1|L5|G|2052
5LKS|1|L5|C|2053
5LKS|1|L5|U|2054
5LKS|1|L5|G|2055
5LKS|1|L5|G|2056
5LKS|1|L5|A|2057
5LKS|1|L5|G|2058
Current chains
- Chain L5
- 28S ribosomal RNA
Nearby chains
- Chain L7
- 5S ribosomal RNA; 5S rRNA
- Chain LB
- 60S ribosomal protein L3
- Chain LF
- 60S ribosomal protein L7
- Chain LH
- 60S ribosomal protein L9
- Chain LI
- 60S ribosomal protein L10-like
- Chain LM
- 60S ribosomal protein L14
- Chain LO
- 60S ribosomal protein L13a
- Chain LS
- 60S ribosomal protein L18a
- Chain Lf
- 60S ribosomal protein L35a
- Chain Lm
- Ubiquitin-60S ribosomal protein L40
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