IL_5LKS_287
3D structure
- PDB id
- 5LKS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure-function insights reveal the human ribosome as a cancer target for antibiotics
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUGCCUACCCUAC*GCGGGUAACCC
- Length
- 24 nucleotides
- Bulged bases
- 5LKS|1|S2|G|1552, 5LKS|1|S2|C|1554, 5LKS|1|S2|U|1555, 5LKS|1|S2|C|1557, 5LKS|1|S2|A|1580, 5LKS|1|S2|C|1581
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5LKS|1|S2|G|1550
5LKS|1|S2|U|1551
5LKS|1|S2|G|1552
5LKS|1|S2|C|1553
5LKS|1|S2|C|1554
5LKS|1|S2|U|1555
5LKS|1|S2|A|1556
5LKS|1|S2|C|1557
5LKS|1|S2|C|1558
5LKS|1|S2|C|1559
5LKS|1|S2|U|1560
5LKS|1|S2|A|1561
5LKS|1|S2|C|1562
*
5LKS|1|S2|G|1573
5LKS|1|S2|C|1574
5LKS|1|S2|G|1575
5LKS|1|S2|G|1576
5LKS|1|S2|G|1577
5LKS|1|S2|U|1578
5LKS|1|S2|A|1579
5LKS|1|S2|A|1580
5LKS|1|S2|C|1581
5LKS|1|S2|C|1582
5LKS|1|S2|C|1583
Current chains
- Chain S2
- 18S ribosomal RNA
Nearby chains
- Chain SD
- 40S ribosomal protein S3
- Chain SK
- 40S ribosomal protein S10
- Chain ST
- 40S ribosomal protein S19
- Chain SU
- 40S ribosomal protein S20
- Chain Sd
- 40S ribosomal protein S29
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