IL_5LL6_013
3D structure
- PDB id
- 5LL6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 40S ABCE1 post-splitting complex in ribosome recycling and translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.9 Å
Loop
- Sequence
- CGAC*GAAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LL6_013 not in the Motif Atlas
- Homologous match to IL_4V88_396
- Geometric discrepancy: 0.4587
- The information below is about IL_4V88_396
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_09705.12
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 35
Unit IDs
5LL6|1|2|C|186
5LL6|1|2|G|187
5LL6|1|2|A|188
5LL6|1|2|C|189
*
5LL6|1|2|G|196
5LL6|1|2|A|197
5LL6|1|2|A|198
5LL6|1|2|G|199
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain V
- 40S ribosomal protein S8-A
Coloring options: