IL_5LMT_055
3D structure
- PDB id
- 5LMT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of bacterial 30S-IF1-IF3-mRNA-tRNA translation pre-initiation complex(state-3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.15 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- 5LMT|1|A|A|1492, 5LMT|1|A|A|1493
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LMT_055 not in the Motif Atlas
- Geometric match to IL_5Z1I_003
- Geometric discrepancy: 0.249
- The information below is about IL_5Z1I_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_31737.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 11
Unit IDs
5LMT|1|A|C|1407
5LMT|1|A|A|1408
5LMT|1|A|C|1409
*
5LMT|1|A|G|1491
5LMT|1|A|A|1492
5LMT|1|A|A|1493
5LMT|1|A|G|1494
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain L
- 30S ribosomal protein S12
- Chain W
- Translation initiation factor IF-1
- Chain X
- Translation initiation factor IF-3
- Chain Y
- mRNA
Coloring options: