IL_5LMV_034
3D structure
- PDB id
- 5LMV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of bacterial 30S-IF1-IF2-IF3-mRNA-tRNA translation pre-initiation complex(state-III)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.9 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 5LMV|1|A|A|1394
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LMV_034 not in the Motif Atlas
- Homologous match to IL_6CZR_147
- Geometric discrepancy: 0.1453
- The information below is about IL_6CZR_147
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_31462.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 130
Unit IDs
5LMV|1|A|G|922
5LMV|1|A|A|923
*
5LMV|1|A|U|1393
5LMV|1|A|A|1394
5LMV|1|A|C|1395
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain E
- 30S ribosomal protein S5
Coloring options: