IL_5LYB_066
3D structure
- PDB id
- 5LYB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the S.cerevisiae 80S ribosome in complex with the A-site bound aminoacyl-tRNA analog ACCPmn
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.25 Å
Loop
- Sequence
- UCUUC*GGAAUA
- Length
- 11 nucleotides
- Bulged bases
- 5LYB|1|1|U|1629
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LYB_066 not in the Motif Atlas
- Geometric match to IL_5TBW_066
- Geometric discrepancy: 0.109
- The information below is about IL_5TBW_066
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_48431.1
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5LYB|1|1|U|1627
5LYB|1|1|C|1628
5LYB|1|1|U|1629
5LYB|1|1|U|1630
5LYB|1|1|C|1631
*
5LYB|1|1|G|1811
5LYB|1|1|G|1812
5LYB|1|1|A|1813
5LYB|1|1|A|1814
5LYB|1|1|U|1815
5LYB|1|1|A|1816
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain N7
- 60S ribosomal protein L27-A
Coloring options: