Motif IL_48431.1 Version IL_48431.1 of this group appears in releases 3.80 to 3.90
#S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 5-6 | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1 | IL_8C3A_072 | 8C3A | 0.0000 | 2 | 1 | LSU rRNA | G | 1807 | G | 1808 | A | 1809 | A | 1810 | A | 1812 | * | U | 1623 | C | 1624 | U | 1626 | C | 1627 | cWW | cWW |
2 | IL_5TBW_066 | 5TBW | 0.1019 | 2 | 1 | LSU rRNA | G | 1811 | G | 1812 | A | 1813 | A | 1814 | A | 1816 | * | U | 1627 | C | 1628 | U | 1630 | C | 1631 | cWW | cWW |
3D structures
Complete motif including flanking bases
Sequence | Counts |
---|---|
GGAAUA*UCUUC | 2 |
Non-Watson-Crick part of the motif
Sequence | Counts |
---|---|
GAAU*CUU | 2 |
Release history
Release | 3.80 | 3.81 | 3.82 | 3.83 | 3.84 | 3.85 | 3.86 | 3.87 | 3.88 | 3.89 | 3.90 |
---|---|---|---|---|---|---|---|---|---|---|---|
Date | 2024-01-31 | 2024-02-28 | 2024-03-27 | 2024-04-24 | 2024-05-22 | 2024-06-19 | 2024-07-17 | 2024-08-14 | 2024-09-11 | 2024-10-09 | 2024-11-06 |
Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (2)
- Basepair signature
- cWW-L-R-L-R-L-cWW
- Heat map statistics
- Min 0.10 | Avg 0.05 | Max 0.10
Coloring options: