IL_5LZB_087

3D structure

PDB id

5LZB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.3 Å

Loop

Sequence

GCUUUGAAGUG*CAUGGAGC

Length

19 nucleotides

Bulged bases

5LZB|1|A|U|2130, 5LZB|1|A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZB|1|A|G|2128
5LZB|1|A|C|2129
5LZB|1|A|U|2130
5LZB|1|A|U|2131
5LZB|1|A|U|2132
5LZB|1|A|G|2133
5LZB|1|A|A|2134
5LZB|1|A|A|2135
5LZB|1|A|G|2136
5LZB|1|A|U|2137
5LZB|1|A|G|2138
*
5LZB|1|A|C|2153
5LZB|1|A|A|2154
5LZB|1|A|U|2155
5LZB|1|A|G|2156
5LZB|1|A|G|2157
5LZB|1|A|A|2158
5LZB|1|A|G|2159
5LZB|1|A|C|2160

Current chains

Chain A

23S ribosomal RNA

Nearby chains