IL_5LZB_132
3D structure
- PDB id
- 5LZB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- UAGUA*UAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZB_132 not in the Motif Atlas
- Homologous match to IL_6CZR_124
- Geometric discrepancy: 0.3096
- The information below is about IL_6CZR_124
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38684.1
- Basepair signature
- cWW-L-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
5LZB|1|a|U|249
5LZB|1|a|A|250
5LZB|1|a|G|251
5LZB|1|a|U|252
5LZB|1|a|A|253
*
5LZB|1|a|U|273
5LZB|1|a|A|274
5LZB|1|a|G|275
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain q
- 30S ribosomal protein S17
Coloring options: