IL_5LZB_187
3D structure
- PDB id
- 5LZB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 5.3 Å
Loop
- Sequence
- GU(G7M)*CC
- Length
- 5 nucleotides
- Bulged bases
- 5LZB|1|A|U|2068
- QA status
- Modified nucleotides: G7M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZB_187 not in the Motif Atlas
- Homologous match to IL_7A0S_075
- Geometric discrepancy: 0.0798
- The information below is about IL_7A0S_075
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.4
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 117
Unit IDs
5LZB|1|A|G|2067
5LZB|1|A|U|2068
5LZB|1|A|G7M|2069
*
5LZB|1|A|C|2442
5LZB|1|A|C|2443
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain E
- 50S ribosomal protein L4
- Chain L
- 50S ribosomal protein L15
Coloring options: