IL_5LZB_188

3D structure

PDB id

5LZB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of SelB-Sec-tRNASec bound to the 70S ribosome in the initial binding state (IB)

Experimental method

ELECTRON MICROSCOPY

Resolution

5.3 Å

Loop

Sequence

CCUUGAUG*CUUUAAUG

Length

16 nucleotides

Bulged bases

5LZB|1|A|U|2106

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZB|1|A|C|2103
5LZB|1|A|C|2104
5LZB|1|A|U|2105
5LZB|1|A|U|2106
5LZB|1|A|G|2107
5LZB|1|A|A|2108
5LZB|1|A|U|2109
5LZB|1|A|G|2110
*
5LZB|1|A|C|2179
5LZB|1|A|U|2180
5LZB|1|A|U|2181
5LZB|1|A|U|2182
5LZB|1|A|A|2183
5LZB|1|A|A|2184
5LZB|1|A|U|2185
5LZB|1|A|G|2186

Current chains

Chain A

23S ribosomal RNA

Nearby chains