IL_5LZE_086

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGGGAGG*CCGACCUUGAAAUACCAC

Length

26 nucleotides

Bulged bases

5LZE|1|A|G|2125, 5LZE|1|A|G|2168, 5LZE|1|A|U|2172

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZE|1|A|G|2121
5LZE|1|A|U|2122
5LZE|1|A|G|2123
5LZE|1|A|G|2124
5LZE|1|A|G|2125
5LZE|1|A|A|2126
5LZE|1|A|G|2127
5LZE|1|A|G|2128
*
5LZE|1|A|C|2160
5LZE|1|A|C|2161
5LZE|1|A|G|2162
5LZE|1|A|A|2163
5LZE|1|A|C|2164
5LZE|1|A|C|2165
5LZE|1|A|U|2166
5LZE|1|A|U|2167
5LZE|1|A|G|2168
5LZE|1|A|A|2169
5LZE|1|A|A|2170
5LZE|1|A|A|2171
5LZE|1|A|U|2172
5LZE|1|A|A|2173
5LZE|1|A|C|2174
5LZE|1|A|C|2175
5LZE|1|A|A|2176
5LZE|1|A|C|2177

Current chains

Chain A

23S ribosomal RNA

Nearby chains