IL_5LZE_087

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GCUUUGAAGUG*CAUGGAGC

Length

19 nucleotides

Bulged bases

5LZE|1|A|U|2130, 5LZE|1|A|U|2132

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZE|1|A|G|2128
5LZE|1|A|C|2129
5LZE|1|A|U|2130
5LZE|1|A|U|2131
5LZE|1|A|U|2132
5LZE|1|A|G|2133
5LZE|1|A|A|2134
5LZE|1|A|A|2135
5LZE|1|A|G|2136
5LZE|1|A|U|2137
5LZE|1|A|G|2138
*
5LZE|1|A|C|2153
5LZE|1|A|A|2154
5LZE|1|A|U|2155
5LZE|1|A|G|2156
5LZE|1|A|G|2157
5LZE|1|A|A|2158
5LZE|1|A|G|2159
5LZE|1|A|C|2160

Current chains

Chain A

23S ribosomal RNA

Nearby chains