IL_5LZE_106

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GAUAAU*ACGAAAC

Length

13 nucleotides

Bulged bases

5LZE|1|A|A|2765

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZE|1|A|G|2737
5LZE|1|A|A|2738
5LZE|1|A|U|2739
5LZE|1|A|A|2740
5LZE|1|A|A|2741
5LZE|1|A|U|2743
*
5LZE|1|A|A|2761
5LZE|1|A|C|2762
5LZE|1|A|G|2763
5LZE|1|A|A|2764
5LZE|1|A|A|2765
5LZE|1|A|A|2766
5LZE|1|A|C|2767

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain 4

50S ribosomal protein L36

Chain G

50S ribosomal protein L6

Chain J

50S ribosomal protein L13