IL_5LZE_125
3D structure
- PDB id
- 5LZE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CUGCC*GAUG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZE_125 not in the Motif Atlas
- Homologous match to IL_4LFB_008
- Geometric discrepancy: 0.1382
- The information below is about IL_4LFB_008
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_60988.1
- Basepair signature
- cWW-cWW-L-R-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
5LZE|1|a|C|132
5LZE|1|a|U|133
5LZE|1|a|G|134
5LZE|1|a|C|135
5LZE|1|a|C|136
*
5LZE|1|a|G|227
5LZE|1|a|A|228
5LZE|1|a|U|229
5LZE|1|a|G|230
Current chains
- Chain a
- 16S ribosomal RNA
Nearby chains
- Chain p
- 30S ribosomal protein S16
- Chain t
- 30S ribosomal protein S20
Coloring options: