IL_5LZE_168

3D structure

PDB id

5LZE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with Sec-tRNASec in the classical pre-translocation state (C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

AUACAAAG*CAUAAAGU

Length

16 nucleotides

Bulged bases

5LZE|1|a|U|1286

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZE|1|a|A|1246
5LZE|1|a|U|1247
5LZE|1|a|A|1248
5LZE|1|a|C|1249
5LZE|1|a|A|1250
5LZE|1|a|A|1251
5LZE|1|a|A|1252
5LZE|1|a|G|1253
*
5LZE|1|a|C|1284
5LZE|1|a|A|1285
5LZE|1|a|U|1286
5LZE|1|a|A|1287
5LZE|1|a|A|1288
5LZE|1|a|A|1289
5LZE|1|a|G|1290
5LZE|1|a|U|1291

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain g

30S ribosomal protein S7

Chain i

30S ribosomal protein S9

Chain j

30S ribosomal protein S10

Chain n

30S ribosomal protein S14