IL_5LZF_137

3D structure

PDB id

5LZF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the 70S ribosome with fMetSec-tRNASec in the hybrid pre-translocation state (H)

Experimental method

ELECTRON MICROSCOPY

Resolution

4.6 Å

Loop

Sequence

UGAAGAAGG*UUGUAAAG

Length

17 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZF|1|a|U|409
5LZF|1|a|G|410
5LZF|1|a|A|411
5LZF|1|a|A|412
5LZF|1|a|G|413
5LZF|1|a|A|414
5LZF|1|a|A|415
5LZF|1|a|G|416
5LZF|1|a|G|417
*
5LZF|1|a|U|426
5LZF|1|a|U|427
5LZF|1|a|G|428
5LZF|1|a|U|429
5LZF|1|a|A|430
5LZF|1|a|A|431
5LZF|1|a|A|432
5LZF|1|a|G|433

Current chains

Chain a

16S ribosomal RNA

Nearby chains

Chain d

30S ribosomal protein S4