IL_5LZS_178
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 5LZS|1|9|C|65, 5LZS|1|9|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZS_178 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.196
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5LZS|1|9|U|63
5LZS|1|9|A|64
5LZS|1|9|C|65
5LZS|1|9|G|66
5LZS|1|9|C|67
5LZS|1|9|A|68
*
5LZS|1|9|U|81
5LZS|1|9|G|82
5LZS|1|9|A|83
5LZS|1|9|A|84
5LZS|1|9|A|85
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain W
- uL24
- Chain YY
- eS24
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