IL_5LZS_255
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- CGCU*AAAAG
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZS_255 not in the Motif Atlas
- Homologous match to IL_8CRE_469
- Geometric discrepancy: 0.3961
- The information below is about IL_8CRE_469
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_73099.1
- Basepair signature
- cWW-cHW-L-R-L-cWW
- Number of instances in this motif group
- 3
Unit IDs
5LZS|1|9|C|1708
5LZS|1|9|G|1709
5LZS|1|9|C|1710
5LZS|1|9|U|1711
*
5LZS|1|9|A|1822
5LZS|1|9|A|1823
5LZS|1|9|A|1824
5LZS|1|9|A|1825
5LZS|1|9|G|1826
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 5
- Large subunit ribosomal RNA; LSU rRNA
- Chain XX
- uS12
- Chain ee
- eS30
- Chain hh
- mRNA
- Chain ii
- Transfer RNA; tRNA
- Chain n
- 60s ribosomal protein l41
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