Motif IL_73099.1 Version IL_73099.1 of this group appears in releases 4.1 to 4.1
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name for chain | 1 | 2 | 3 | 4 | 5 | break | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 5-6 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | IL_9J6P_002 | 9J6P | 0.1694 | 0 | A+B | RNA (22-mer) | A | 16 | G | 17 | G | 18 | A | 19 | C | 20 | * | G | 6 | G | 7 | G | 8 | U | 9 | cWW | cHW | cWW |
| 2 | IL_9J6P_001 | 9J6P | 0.0000 | 0 | B+A | RNA (22-mer) | A | 16 | G | 17 | G | 18 | A | 19 | C | 20 | * | G | 6 | G | 7 | G | 8 | U | 9 | cWW | cHW | cWW |
| 3 | IL_8CRE_469 | 8CRE | 0.3856 | 0 | CM | SSU rRNA | A | 1740 | A | 1741 | A | 1742 | A | 1743 | G | 1744 | * | C | 1631 | G | 1632 | C | 1633 | U | 1634 | cWW | ncWWa | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| AGGAC*GGGU | 2 |
| AAAAG*CGCU | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| GGA*GG | 2 |
| AAA*GC | 1 |
Release history
| Release | 4.1 |
|---|---|
| Date | 2025-09-10 |
| Status | New id, 1 parent |
Parent motifs
This motif has no parent motifs.
Children motifs
This motif has no children motifs.- Annotations
-
- (3)
- Basepair signature
- cWW-cHW-L-R-L-cWW
- Heat map statistics
- Min 0.17 | Avg 0.22 | Max 0.44
Coloring options: