IL_5LZS_281
3D structure
- PDB id
- 5LZS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal elongation complex with aminoacyl-tRNA, eEF1A, and didemnin B
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.31 Å
Loop
- Sequence
- GACAGGAUUG*CUCGAUUC
- Length
- 18 nucleotides
- Bulged bases
- 5LZS|1|9|G|1285
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZS_281 not in the Motif Atlas
- Homologous match to IL_8P9A_470
- Geometric discrepancy: 0.2606
- The information below is about IL_8P9A_470
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_28304.1
- Basepair signature
- cWW-R-L-R-L-R-L-R-L-L-L-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
5LZS|1|9|G|1281
5LZS|1|9|A|1282
5LZS|1|9|C|1283
5LZS|1|9|A|1284
5LZS|1|9|G|1285
5LZS|1|9|G|1286
5LZS|1|9|A|1287
5LZS|1|9|U|1288
5LZS|1|9|U|1289
5LZS|1|9|G|1290
*
5LZS|1|9|C|1309
5LZS|1|9|U|1310
5LZS|1|9|C|1311
5LZS|1|9|G|1312
5LZS|1|9|A|1313
5LZS|1|9|U|1314
5LZS|1|9|U|1315
5LZS|1|9|C|1316
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain KK
- eS10
- Chain MM
- 40S ribosomal protein S12
- Chain dd
- uS14
- Chain ff
- eS31
Coloring options: