IL_5LZU_136
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CUC*GUGAG
- Length
- 8 nucleotides
- Bulged bases
- 5LZU|1|5|G|4522, 5LZU|1|5|A|4523
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZU_136 not in the Motif Atlas
- Geometric match to IL_5TBW_108
- Geometric discrepancy: 0.0717
- The information below is about IL_5TBW_108
- Detailed Annotation
- Isolated non-canonical cWW with bulges
- Broad Annotation
- Isolated non-canonical cWW with bulges
- Motif group
- IL_54650.3
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 16
Unit IDs
5LZU|1|5|C|4456
5LZU|1|5|U|4457
5LZU|1|5|C|4458
*
5LZU|1|5|G|4520
5LZU|1|5|U|4521
5LZU|1|5|G|4522
5LZU|1|5|A|4523
5LZU|1|5|G|4524
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- uL3
- Chain V
- uL14
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
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