IL_5LZU_255
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 5LZU|1|9|C|1701, 5LZU|1|9|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZU_255 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.1841
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
5LZU|1|9|C|1700
5LZU|1|9|C|1701
5LZU|1|9|G|1702
*
5LZU|1|9|C|1833
5LZU|1|9|A|1834
5LZU|1|9|A|1835
5LZU|1|9|G|1836
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain aa
- eS26
- Chain hh
- mRNA (UGA stop codon)
- Chain ii
- Eukaryotic peptide chain release factor subunit 1
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