IL_5LZU_292
3D structure
- PDB id
- 5LZU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.75 Å
Loop
- Sequence
- GAAAAAAUU*ACCGCAGC
- Length
- 17 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZU_292 not in the Motif Atlas
- Homologous match to IL_8CRE_430
- Geometric discrepancy: 0.4228
- The information below is about IL_8CRE_430
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_59049.1
- Basepair signature
- cWW-cWW-L-R-L-R-L-R-L-R-L-cWW-L
- Number of instances in this motif group
- 2
Unit IDs
5LZU|1|9|G|807
5LZU|1|9|A|808
5LZU|1|9|A|809
5LZU|1|9|A|810
5LZU|1|9|A|811
5LZU|1|9|A|812
5LZU|1|9|A|813
5LZU|1|9|U|814
5LZU|1|9|U|815
*
5LZU|1|9|A|849
5LZU|1|9|C|850
5LZU|1|9|C|851
5LZU|1|9|G|852
5LZU|1|9|C|853
5LZU|1|9|A|854
5LZU|1|9|G|855
5LZU|1|9|C|856
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain EE
- 40S ribosomal protein S4
- Chain JJ
- Ribosomal protein S9 (Predicted)
- Chain LL
- uS17
- Chain WW
- uS8
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