IL_5LZV_103
3D structure
- PDB id
- 5LZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- CGUAAC*GGAUAAG
- Length
- 13 nucleotides
- Bulged bases
- 5LZV|1|5|U|2880
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZV_103 not in the Motif Atlas
- Geometric match to IL_4V9F_063
- Geometric discrepancy: 0.0944
- The information below is about IL_4V9F_063
- Detailed Annotation
- tSH-tSH-tHH-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_20700.1
- Basepair signature
- cWW-tSH-L-R-tHH-tHS-cWW
- Number of instances in this motif group
- 10
Unit IDs
5LZV|1|5|C|2867
5LZV|1|5|G|2868
5LZV|1|5|U|2869
5LZV|1|5|A|2870
5LZV|1|5|A|2871
5LZV|1|5|C|2872
*
5LZV|1|5|G|2877
5LZV|1|5|G|2878
5LZV|1|5|A|2879
5LZV|1|5|U|2880
5LZV|1|5|A|2881
5LZV|1|5|A|2882
5LZV|1|5|G|2883
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain 9
- Small subunit ribosomal RNA; SSU rRNA
- Chain n
- eL41
- Chain p
- eL43
Coloring options: