IL_5LZV_265

3D structure

PDB id

5LZV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.35 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

5LZV|1|5|G|119, 5LZV|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZV|1|5|C|118
5LZV|1|5|G|119
5LZV|1|5|A|120
5LZV|1|5|A|121
5LZV|1|5|U|122
*
5LZV|1|5|A|147
5LZV|1|5|A|148
5LZV|1|5|A|149
5LZV|1|5|U|150
5LZV|1|5|G|151
5LZV|1|5|U|152
5LZV|1|5|G|153

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain G

eL8

Chain N

eL15

Chain h

uL29