IL_5LZV_281
3D structure
- PDB id
- 5LZV (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian ribosomal termination complex with accommodated eRF1(AAQ) and ABCE1.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- GUAUUG*CAAGAC
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZV_281 not in the Motif Atlas
- Geometric match to IL_5TBW_476
- Geometric discrepancy: 0.3575
- The information below is about IL_5TBW_476
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_31007.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 5
Unit IDs
5LZV|1|9|G|942
5LZV|1|9|U|943
5LZV|1|9|A|944
5LZV|1|9|U|945
5LZV|1|9|U|946
5LZV|1|9|G|947
*
5LZV|1|9|C|979
5LZV|1|9|A|980
5LZV|1|9|A|981
5LZV|1|9|G|982
5LZV|1|9|A|983
5LZV|1|9|C|984
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain A
- uL2
- Chain BB
- eS1
- Chain OO
- uS11
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