IL_5LZW_276
3D structure
- PDB id
- 5LZW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a truncated mRNA.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.53 Å
Loop
- Sequence
- GGAAGUCGG*CUGUC
- Length
- 14 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZW_276 not in the Motif Atlas
- Homologous match to IL_8P9A_305
- Geometric discrepancy: 0.0671
- The information below is about IL_8P9A_305
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_80252.1
- Basepair signature
- cWW-tSH-cWW-tHW-R-L-cWW-L-L-R
- Number of instances in this motif group
- 10
Unit IDs
5LZW|1|5|G|2847
5LZW|1|5|G|2848
5LZW|1|5|A|2849
5LZW|1|5|A|2850
5LZW|1|5|G|2851
5LZW|1|5|U|2852
5LZW|1|5|C|2853
5LZW|1|5|G|2854
5LZW|1|5|G|2855
*
5LZW|1|5|C|3837
5LZW|1|5|U|3838
5LZW|1|5|G|3839
5LZW|1|5|U|3840
5LZW|1|5|C|3841
Current chains
- Chain 5
- 28S ribosomal RNA
Nearby chains
- Chain B
- uL3
- Chain V
- uL14
Coloring options: