IL_5LZX_179
3D structure
- PDB id
- 5LZX (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.67 Å
Loop
- Sequence
- UACGCA*UGAAA
- Length
- 11 nucleotides
- Bulged bases
- 5LZX|1|9|C|65, 5LZX|1|9|C|67
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZX_179 not in the Motif Atlas
- Homologous match to IL_4V88_390
- Geometric discrepancy: 0.2307
- The information below is about IL_4V88_390
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87517.1
- Basepair signature
- cWW-L-R-L-R-tHS-L-cWW
- Number of instances in this motif group
- 2
Unit IDs
5LZX|1|9|U|63
5LZX|1|9|A|64
5LZX|1|9|C|65
5LZX|1|9|G|66
5LZX|1|9|C|67
5LZX|1|9|A|68
*
5LZX|1|9|U|81
5LZX|1|9|G|82
5LZX|1|9|A|83
5LZX|1|9|A|84
5LZX|1|9|A|85
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain GG
- 40S ribosomal protein S6
- Chain YY
- eS24
Coloring options: