IL_5LZX_269

3D structure

PDB id

5LZX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a UGA stop codon.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.67 Å

Loop

Sequence

CGAAU*AAAUGUG

Length

12 nucleotides

Bulged bases

5LZX|1|5|G|119, 5LZX|1|5|U|150

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZX|1|5|C|118
5LZX|1|5|G|119
5LZX|1|5|A|120
5LZX|1|5|A|121
5LZX|1|5|U|122
*
5LZX|1|5|A|147
5LZX|1|5|A|148
5LZX|1|5|A|149
5LZX|1|5|U|150
5LZX|1|5|G|151
5LZX|1|5|U|152
5LZX|1|5|G|153

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain 8

5.8S ribosomal RNA; 5.8S rRNA

Chain G

eL8

Chain N

Ribosomal protein L15

Chain h

uL29