IL_5LZY_036

3D structure

PDB id

5LZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GAAGGUGGC*GUGUUACAGC

Length

19 nucleotides

Bulged bases

5LZY|1|5|G|748, 5LZY|1|5|C|916

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZY|1|5|G|745
5LZY|1|5|A|746
5LZY|1|5|A|747
5LZY|1|5|G|748
5LZY|1|5|G|749
5LZY|1|5|U|750
5LZY|1|5|G|751
5LZY|1|5|G|752
5LZY|1|5|C|753
*
5LZY|1|5|G|910
5LZY|1|5|U|911
5LZY|1|5|G|912
5LZY|1|5|U|913
5LZY|1|5|U|914
5LZY|1|5|A|915
5LZY|1|5|C|916
5LZY|1|5|A|917
5LZY|1|5|G|918
5LZY|1|5|C|919

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain M

eL14

Chain S

eL20

Chain s

uL10