IL_5LZY_120

3D structure

PDB id

5LZY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the mammalian rescue complex with Pelota and Hbs1l assembled on a polyadenylated mRNA.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.99 Å

Loop

Sequence

GGCGAGC*GGCUCUC

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5LZY|1|5|G|4094
5LZY|1|5|G|4095
5LZY|1|5|C|4096
5LZY|1|5|G|4097
5LZY|1|5|A|4098
5LZY|1|5|G|4099
5LZY|1|5|C|4100
*
5LZY|1|5|G|4108
5LZY|1|5|G|4109
5LZY|1|5|C|4110
5LZY|1|5|U|4111
5LZY|1|5|C|4112
5LZY|1|5|U|4113
5LZY|1|5|C|4114

Current chains

Chain 5

28S ribosomal RNA

Nearby chains

Chain A

uL2

Chain G

eL8

Chain g

eL34