IL_5LZZ_252
3D structure
- PDB id
- 5LZZ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the mammalian rescue complex with Pelota and Hbs1l (combined)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.47 Å
Loop
- Sequence
- CCG*CAAG
- Length
- 7 nucleotides
- Bulged bases
- 5LZZ|1|9|C|1701, 5LZZ|1|9|A|1835
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5LZZ_252 not in the Motif Atlas
- Geometric match to IL_4V88_463
- Geometric discrepancy: 0.1951
- The information below is about IL_4V88_463
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61438.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 5
Unit IDs
5LZZ|1|9|C|1700
5LZZ|1|9|C|1701
5LZZ|1|9|G|1702
*
5LZZ|1|9|C|1833
5LZZ|1|9|A|1834
5LZZ|1|9|A|1835
5LZZ|1|9|G|1836
Current chains
- Chain 9
- 18S ribosomal RNA
Nearby chains
- Chain 2
- Transfer RNA; tRNA
- Chain aa
- eS26
- Chain hh
- mRNA
- Chain ii
- Protein pelota homolog
Coloring options: