IL_5M1J_098

3D structure

PDB id

5M1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nonstop ribosomal complex bound with Dom34 and Hbs1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

AAGAGA*UUUCU

Length

11 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5M1J|1|14|A|2438
5M1J|1|14|A|2439
5M1J|1|14|G|2440
5M1J|1|14|A|2441
5M1J|1|14|G|2442
5M1J|1|14|A|2443
*
5M1J|1|14|U|2504
5M1J|1|14|U|2505
5M1J|1|14|U|2506
5M1J|1|14|C|2507
5M1J|1|14|U|2508

Current chains

Chain 14

25S ribosomal RNA

Nearby chains

Chain B2

40S ribosomal protein S1-A

Chain G5

60S ribosomal protein L8-A

Chain N5

60S ribosomal protein L15-A

Chain i5

60S ribosomal protein L36-A