IL_5M1J_259

3D structure

PDB id

5M1J (explore in PDB, NAKB, or RNA 3D Hub)

Description

Nonstop ribosomal complex bound with Dom34 and Hbs1

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACA*UUUC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5M1J|1|22|G|1233
5M1J|1|22|A|1234
5M1J|1|22|C|1235
5M1J|1|22|A|1236
*
5M1J|1|22|U|1249
5M1J|1|22|U|1250
5M1J|1|22|U|1251
5M1J|1|22|C|1252

Current chains

Chain 22

18S ribosomal RNA

Nearby chains

Chain K2

40S ribosomal protein S10-A

Chain M2

40S ribosomal protein S12

Chain P2

40S ribosomal protein S15

Chain d2

40S ribosomal protein S29-A

Chain f2

Ubiquitin-40S ribosomal protein S31