IL_5M1J_263
3D structure
- PDB id
- 5M1J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Nonstop ribosomal complex bound with Dom34 and Hbs1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GUCGCUAG*CUAAAAGUC
- Length
- 17 nucleotides
- Bulged bases
- 5M1J|1|22|A|1756
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5M1J|1|22|G|1642
5M1J|1|22|U|1643
5M1J|1|22|C|1644
5M1J|1|22|G|1645
5M1J|1|22|C|1646
5M1J|1|22|U|1647
5M1J|1|22|A|1648
5M1J|1|22|G|1649
*
5M1J|1|22|C|1751
5M1J|1|22|U|1752
5M1J|1|22|A|1753
5M1J|1|22|A|1754
5M1J|1|22|A|1755
5M1J|1|22|A|1756
5M1J|1|22|G|1757
5M1J|1|22|U|1758
5M1J|1|22|C|1759
Current chains
- Chain 22
- 18S ribosomal RNA
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain A1
- Protein DOM34
- Chain X2
- 40S ribosomal protein S23-A
- Chain e2
- 40S ribosomal protein S30-A
- Chain n5
- 60S ribosomal protein L41-B
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