IL_5MC6_235

3D structure

PDB id

5MC6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of a native ribosome-Ski2-Ski3-Ski8 complex from S. cerevisiae

Experimental method

ELECTRON MICROSCOPY

Resolution

3.8 Å

Loop

Sequence

UGGCCGG*UUUCCA

Length

13 nucleotides

Bulged bases

5MC6|1|2|G|655

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5MC6|1|2|U|650
5MC6|1|2|G|651
5MC6|1|2|G|652
5MC6|1|2|C|653
5MC6|1|2|C|654
5MC6|1|2|G|655
5MC6|1|2|G|656
*
5MC6|1|2|U|679
5MC6|1|2|U|680
5MC6|1|2|U|681
5MC6|1|2|C|682
5MC6|1|2|C|683
5MC6|1|2|A|684

Current chains

Chain 2

18S ribosomal RNA

Nearby chains