IL_5ME1_045
3D structure
- PDB id
- 5ME1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 30S Pre-Initiation Complex 2 (30S IC-2) Stalled by GE81112
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 13.5 Å
Loop
- Sequence
- GCUGCAU*AUG(2MG)C
- Length
- 12 nucleotides
- Bulged bases
- 5ME1|1|A|C|1054
- QA status
- Modified nucleotides: 2MG
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_5ME1_045 not in the Motif Atlas
- Homologous match to IL_5J7L_047
- Geometric discrepancy: 0.1946
- The information below is about IL_5J7L_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
5ME1|1|A|G|1050
5ME1|1|A|C|1051
5ME1|1|A|U|1052
5ME1|1|A|G|1053
5ME1|1|A|C|1054
5ME1|1|A|A|1055
5ME1|1|A|U|1056
*
5ME1|1|A|A|1204
5ME1|1|A|U|1205
5ME1|1|A|G|1206
5ME1|1|A|2MG|1207
5ME1|1|A|C|1208
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain C
- 30S ribosomal protein S3
- Chain J
- 30S ribosomal protein S10
- Chain N
- 30S ribosomal protein S14
- Chain V
- Translation initiation factor IF-1
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